Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNDMEDHLLTVLSVASGVPKEEISRD-SRMEDLAFDSLVVSELSLKLRKEFGVTGVDDELDLLETVDELFQLVEKHRAA
4ETW Chain:D ((3-75))
----IEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGH---
General information:
TITO was launched using:
RESULT:
Template:
4ETW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33038 for 488 contacts (-67.7/contact) +
2D Compatibility (PS) -7557 + (NN) -4306 + (LL) 300
1D Compatibility (HY) -3200 + (ID) 1100
Total energy: -48901.0 ( -100.21 by residue)
QMean score : 0.637
(partial model without unconserved sides chains):
PDB file :
Tito_4ETW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ETW-query.scw
PDB file :
Tito_Scwrl_4ETW.pdb
: