Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASHELDYRILGESMQTVEIELDPGETVIAEAGAMNYMTGDIRFTARMGDGSDGSLLGKLWSAGKRKLGGESVFMTHFTNEGQGKQHVAFAAPYPG-SVVAVDLDDVGGRLFCQKDSFLCAAYGTR-VGIAFTKRLGAGFFGGEGFILQKLEGDGLVFVHAGGTLIRRQ-LNGE-TLRVDTGCLVAFTDGIDYDVQLAGGLKSMLFGGEGLLLTT-LKGSGTVWLQSLPFSRLAGRIYDAT-FRAREE-VRTNNG--- |
| 3EC4 Chain:A ((5-228)) | --DHPLD-RPVWNSLGGPQSELDVAS------GNLRRLDPAYGPFAAAAPGAEAGLASLL-----QGDADEIWLVEPEPVAPPPGTRVIRVAPLLQMIADGPVPSFDDPGI-----VALGETDVPEMTALALATEPGP-------WASGTWRYGQFYGVRIDGRLA--AMAGERMRPAPNLAEVSGVCTWPEYR---GRGLAARLIRK---VIAGMAARGEVPYLHSYASNASAIRLYESLGFRARRAMTATLLGKST |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3EC4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -55907 for 1630 contacts (-34.3/contact) +
2D Compatibility (PS) -21993 + (NN) 1219 + (LL) 2220
1D Compatibility (HY) -800 + (ID) 1900
Total energy: -77161.0 ( -47.34 by residue)
QMean score : 0.155
|
|
|