Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSNRYPLPAQTGLVVAPGLPP-KNSTLRPDQLNKRLSSAWHHLYDLCPELLK----------IDPPDGLTILR-------------GFLQWAA--------------EQKAAWNWAMH----LRLYCWLLQSPFGAKVTDEHL--EVLMDASAARWTVDDTSANRGILLASQG---------GAHITQDWKA---PQAGAGTRVPLERLDLPAP-NWTFAY-CAVPDPRLREFPGWKPLPARGSLVG------------------------------ |
| 2IWV Chain:A ((5-281)) | -NDWHFNIGAMYEIENVEGYGEDMDGLAEPSVYFNAANGPWRIALAYYQEGPVDYSAGKRGTWFDRPELEVHYQFLENDDFSFGLTGGFRNYGYHYVDEPGKDTANMQRWKIAPDWDVKLTDDLRFNGWLSMYKFANDLNTTGYADTRVETETGLQYTFNETVALRVNYYLERGFNMDDSRNNGEFSTQEIRAYLPLTLGNHSVTPYTRIGLDRWSNWDWQDDIEREGHDFNRVGLFYGYDFQNGLSVSLEYAFEWQDHDEGDSDKFHYAGVGVNYSF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IWV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 11472 for 1070 contacts (10.7/contact) +
2D Compatibility (PS) -18781 + (NN) 18964 + (LL) 208
1D Compatibility (HY) -6800 + (ID) 1700
Total energy: 3363.0 ( 3.14 by residue)
QMean score : -0.010
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