Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIQSKLPNVGTTIFTRMSQLAAECGAINLSQGFPDFDGPPELREAVGRHIAAGH---NQYAPMTGLPALREQVAKKIEQFYGRRVSADSEVTITPGATEAIFSAIQALVHPGDEVVVLDPSYDSYEPSVQLAGGRCVHVPL-----ALPDFSIDWQRMAEAIGPRTRLVIINTPHNPSGALISREELDRLAALIRDRDIYLISDEVYEHLVFDGVAHTSVLSHDELYPRSFVVSSFGKTYHVTGWKTGYVVAPPALSAELRKVHQYVNFCGVTPLQWALADYMAGHPEHLR-------QLPGFYQAKRDLFCDLLLDSRFRFTRAPGTYFQCVDYSAIR---PDLD-------DVAMAEWLTREHGVAAIPVSVFY----EKAPDAMRLVRFCYAKREETLRQAAEKLCAI |
| 4WP0 Chain:A ((9-415)) | ----RLDGIDYNPWVEFVKLASEHDVVNLGQGFPDFP-PPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGLGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAG-TFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFD--HYIRFCFVKDEATLQAMDEKL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WP0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -249220 for 3167 contacts (-78.7/contact) +
2D Compatibility (PS) -41965 + (NN) -28330 + (LL) 1152
1D Compatibility (HY) -29200 + (ID) 6850
Total energy: -354413.0 ( -111.91 by residue)
QMean score : 0.533
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