Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNPLYRAAIHQLFLALDLPT-PNDEESVLSLQVGP-HLCHLAEHPT-DHLLMFTRLEGQG------DATANEQNLFSQDPCKPILGRDPESGERLLWNRQPLQLLDRAQIHHQLEQLVAAAEELR
3KXY Chain:A ((3-126))
LTSKVNRLLAEFAGRIGLPSLSLDEEGMASLLFDEQVGVTLLLLAERERLLLEADVVGIDVLGEGIFRQLASFNRHWHR-FDLHFGFDELTGKVQLYAQILAAQLTLECFEATLANLLDHAEFWQ
General information:
TITO was launched using:
RESULT:
Template:
3KXY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44057 for 751 contacts (-58.7/contact) +
2D Compatibility (PS) -12543 + (NN) -6305 + (LL) -140
1D Compatibility (HY) -5200 + (ID) 1050
Total energy: -69295.0 ( -92.27 by residue)
QMean score : 0.497
(partial model without unconserved sides chains):
PDB file :
Tito_3KXY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KXY-query.scw
PDB file :
Tito_Scwrl_3KXY.pdb
: