Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPQVLLSSKPPGLNSIDHAEPAGAPALEAAGCHCPGAVPTASAHAARANRGEPRDRVAGARCDFALSTGVRLAPLSPSSRPAPRTGSPHQFQRTLSTKKFASTQTTSSRWVSCNPSWRIQ
1LE6 Chain:A ((9-40))
---------------VGCVGPRTPIAYMKYGCFCGL-----------GGHGQPRDAID--------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1LE6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5450 for 148 contacts (-36.8/contact) +
2D Compatibility (PS) -3249 + (NN) -3599 + (LL) 4024
1D Compatibility (HY) -2000 + (ID) 450
Total energy: -10724.0 ( -72.46 by residue)
QMean score : 0.738
(partial model without unconserved sides chains):
PDB file :
Tito_1LE6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1LE6-query.scw
PDB file :
Tito_Scwrl_1LE6.pdb
: