Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIEKHNIKLATFIAALFYDLSTQKQVRIPTQIEKRDRELYELVKKSKR-PVALLVDETHDLNGHTLTGLKRLLELAEDDSGRRRLSIVLAGHPKLCNDLRRPTMEEIGYRTDIFELQEKMQSAGLPV
2WKA Chain:B ((185-222))
---------------------------------------LAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELG---------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2WKA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1968 for 190 contacts (-10.4/contact) +
2D Compatibility (PS) -3875 + (NN) -398 + (LL) 7004
1D Compatibility (HY) -2400 + (ID) 950
Total energy: -2587.0 ( -13.62 by residue)
QMean score : 0.347
(partial model without unconserved sides chains):
PDB file :
Tito_2WKA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WKA-query.scw
PDB file :
Tito_Scwrl_2WKA.pdb
: