Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNAADRVMQSYGRCCA-STGFFDDFYRHFLASSPQIRAKFATTDM-------TAQKHLLRAGIMNLVMYARGMSDSKLRALGASHS-RAALDIRPELYDLWLDALLMAVAEHD-RDCDAETRDAWRDVMGRGIAVIKSYY
1WMU Chain:A ((5-140))
-DDKQLIQHVWEKVLEHQEDFGAEALERMFIVYPSTKTYFPHFDLHHDSEQIRHHGKKVVGALGDAVKHIDNL-SATLSELSNLHAYN--LRVDPVNFKLLSHCFQVVLGAHLGREYTPQVQVAYDKFLAAVSAVLAEKY
General information:
TITO was launched using:
RESULT:
Template:
1WMU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74324 for 893 contacts (-83.2/contact) +
2D Compatibility (PS) -13358 + (NN) -6754 + (LL) 468
1D Compatibility (HY) -6800 + (ID) 850
Total energy: -101618.0 ( -113.79 by residue)
QMean score : 0.557
(partial model without unconserved sides chains):
PDB file :
Tito_1WMU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WMU-query.scw
PDB file :
Tito_Scwrl_1WMU.pdb
: