Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRRLENRVALVTGAGQGIGRAIAECFAAEGARVLLATRTASRGQAVLEAIRLGGGTAELLAVDLSEYDAARRAVSATLERFGQLDILLHNAAAFPQCALAELDEGTLERTLAVNLKSCFRLTQAALPALRRSVAGRVLVTSSVTGPRTAIPGLSHYAASKAGVNGFIRAAALELAGDGITVNGVEPGLVATPALGSL--GDAAALAAHIPLGRVGQPLDIAHAMLFLASDEASYITGQTLVVDGGALLPENGGLA
3FTP Chain:A ((3-248))
-KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGS-AGNPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGTTLHVNGGMFM-------
General information:
TITO was launched using:
RESULT:
Template:
3FTP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -154468 for 2090 contacts (-73.9/contact) +
2D Compatibility (PS) -26623 + (NN) -11077 + (LL) 168
1D Compatibility (HY) -14000 + (ID) 4800
Total energy: -210800.0 ( -100.86 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_3FTP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FTP-query.scw
PDB file :
Tito_Scwrl_3FTP.pdb
: