Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTDNHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRH-ELEVYHDGELLRYFNYSSVDARGYFILMPCESLR-RLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIASYVRRRLLDIDVERRPYPSPMLVGTF----ALAPCVAERNRLYVDSQGGLAYFYPIGFDRARLVVSFPREEARELMADTRGESLRRRLQRFVGDES--AEAIAAVTGTSRFKGIPIGYLN-LDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRDACALEDALAGYQAERFPVNQAIVSYGHALATSLEDRQRFAGVFDTALQGSSRTPEALGGERSYQPVRSPAPLG |
3RP8 Chain:A ((23-352)) | ----HMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEI----AAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRSGENMTQFSLAPLIERTGS--RPCPVSRAELQREMLDYWGRDSVQFGKRVTRCEEDADGVT--VWFTDGSSASGDLLIAADGSHSALRPWVLGFTPQRRYAGYVNWNGLVEIDEALAP--GDQWTTFV-GEGKQVSLMPVSAGRFYFFFDVPLPAG---LAEDR-DTLRADLSRYFAGWAPPVQKLIAALDPQTTNRIEIHDIEPFSRLVRGRVALLGDAGHSTTPDIGQGGCAAMEDAVVLG-AVFRQTRDIAA---ALREYEAQR---------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RP8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193116 for 2689 contacts (-71.8/contact) +
2D Compatibility (PS) -33979 + (NN) -6552 + (LL) 4204
1D Compatibility (HY) -10800 + (ID) 4350
Total energy: -244593.0 ( -90.96 by residue)
QMean score : 0.383
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