Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQTLLKLLQDGRFHSGEELGAVLGISRSAVWKRLQHLEAEHGLQFHKVRGRGYRLASPLSLLDPRKIDSLWPVEIMPTVDSTNSEAMRRLAAGASTPFVIVAEQQTAGRGRRGRAWVSPYGENLYYSLAITVRGGARELEGLSLVVGL---AVLRALESLGVQDTGLKWPNDLLQGGKKIAGILLELSGDPADLCHVVIGIGINVNMK-TATDIGQPWTSLREALGELVDRSRLLSALNRQLADYLDRHSREGFAASREEWESCNLWQGAQVILSTALSSIEGRVLGVDSR-GALRLEVDGVEQGFSGGELSLRLRQ |
3EFS Chain:A ((8-231)) | ---------------------------------------------------------------------------LKEVDSTQ-ERLKEWNVSYGT--ALVADRQTKGRGRLGRKWLSQEG-GLYFSFLLN----PKEFENLLQLPLVLGLSVSEALEEITEIPFSLKWPNDVYFQEKKVSGVLRELSKD-----KLIVGIGINVNQREIPEEIKDRATTLYEITGKDWDRKEVLLKVLKRISENLKKFKEKSFKEFKGKIESKMLYLGEEVKL-LGEGKITGKLVGLSEKGGALILTEEGIKEILS-GEFSLR--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EFS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103274 for 1681 contacts (-61.4/contact) +
2D Compatibility (PS) -23340 + (NN) -9660 + (LL) 5832
1D Compatibility (HY) -16800 + (ID) 4000
Total energy: -151242.0 ( -89.97 by residue)
QMean score : 0.460
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