Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFRPRLLLTSLAIALGACSPQDPQAVTSAALAQQVILPTYSRWVEADQALASSALAYCQGKEDLAKARDAFHAAQKAWAELQPLLIGPLAEGNRAWQVQFWPDKKDLVGRQVEQLLKNNPQVDAAALAKASVVVQGLSAYEYILFDSKIDLADAATKARYCPLLEAIGTHQQQLAQDILARWKNDGGMLTQMSKFPNDRYADAHEAIAELLRVQVTALDMLKKKLGTPLGRQSKGIPQPYQAEAWRSNASLASLDASLSGAQA----------LWEGIDGKGLKTLLPAEQKDLAGKIDAAYADSHAKLAALE--QKPLSELLASED--GRNQLNALYDSLNVVHRLHEGDLARALGVQLGFNANDGD |
| 4PMY Chain:B ((42-136)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EAVRDQMDWSTLDAAYRFAQANQMPFQMHVMVWGNQQPEWIKTLRPAEQRREIEQWFAAVAQRYPDIALLEVVNEPLNDPPSKADTGGGNYLQAL------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PMY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13371 for 456 contacts (29.3/contact) +
2D Compatibility (PS) -8311 + (NN) 223 + (LL) 20552
1D Compatibility (HY) -4000 + (ID) 1550
Total energy: 20285.0 ( 44.48 by residue)
QMean score : 0.276
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