Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------MSRRLPFLLR--CALFCGAGLLAATAQARMESLDDDQLSDVVGQAFINLTTDAANGLNFTRINFGADIETQLNMKKLQLGQYNRSGELAGSADIAIDNFA----------LGTVNDTTGAINPFLISNPYIEFAYDGSKMVGIRIGFGEAKGYLSG-DIKTLTGNVPVDLYGTGSQLGGSISCGLLALD-------CLAAKTAITLTGSSQY--TAQAELVNSSGNPDPIRAAMIGLKNGTALDMHDSTIIGSLVNVLLPFLTSNDCKLMGAQTCFNLAQYQSFPIGTVDPNNAQNFIDSSKGFFISMQSQNVQWRDQQDPSKLVAALAGAFLNMSRNADGTAPIKVDFGQAFNGIPRQDTCLGGLNKGC |
| 4CI0 Chain:A ((2-386)) | SERIVISPTSRQEGHAELVMEVDDEGIVTKGRYFSITPVRGLEKMVTGKAPETAPVMVQRICGV-CPIPHTLASVEAIDDSLDIEV--PKAGRLLRELTLAAHHVNSHAIHHF--LIAPDFVPENLMADAINSVSEIRKNAQYVVDMVAGEGIHPSDVRIGGMADNITELARKRLYARLKQLKPKVNEHVELMIGLIEDKGLPEGLGVHNQPTLASHQIYGDRTKFDLDRFTEIMPESWYDDPEIAKRACSTIPLYDGRNVEVGPRARMVEFQGFKER---GVVAQHVARALEMK--TALSRAIEILDELDTSAPVR----------ADFDERGTG----KLGIGAIEAPRGLDVHMAKVE------NGKIQFYSALVPTTWNIPTMGPATEGFHHEYGPHV--IRAYDPCLSCATH-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4CI0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -41342 for 2703 contacts (-15.3/contact) +
2D Compatibility (PS) -32813 + (NN) -4257 + (LL) 1680
1D Compatibility (HY) -10800 + (ID) 2900
Total energy: -90432.0 ( -33.46 by residue)
QMean score : 0.148
|
|
|