Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQLSHRPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFANFYQWQHGDFCALGNMMVAPAARGLGVARYLIGVMENLAREQYKARLMKISCFNANAAGLLLYTQLGYQPRAIAERHDPDGRRVALIQMDKPLEP
4M3S Chain:A ((4-162))
-QLSHRPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFANFYQWQHGDFCALGNMMVAPAARGLGVARYLIGVMENLAREQYKARLMKISCFNANAAGLLLYTQLGYQPRAIAERHDPDGRRVALIQMDKPLEP
General information:
TITO was launched using:
RESULT:
Template:
4M3S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115311 for 1229 contacts (-93.8/contact) +
2D Compatibility (PS) -17211 + (NN) -10557 + (LL) 208
1D Compatibility (HY) -22000 + (ID) 7950
Total energy: -172821.0 ( -140.62 by residue)
QMean score : 0.431
(partial model without unconserved sides chains):
PDB file :
Tito_4M3S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4M3S-query.scw
PDB file :
Tito_Scwrl_4M3S.pdb
: