Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRTTPHLMLEPAFHPGLDTAGSGRDAIGLGAATSGRLDARHGTILSLEDINVSFDGFKALRDLTLYIGVGELRCIIGPNGAGKTTLMDVITGKTRPQSGTAYFGDTLDLTRMSEVQIAQAGIGRKFQKPTVFEALSVFENLELAQRADKSVWASLRARLDGTQRE-RIEEVLATIRLLESRQRPAGLLSHGQKQFLEIGMLLVQEPQLLLLDEPVAGMTDAETEFTAELFKSLARKHSL--MVVEHDMGFVGSIADHVTVLHQGHVLAEGSLAEVQADEQVIEVYLGR |
4P33 Chain:A ((3-235)) | --------------------------------------------LTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIV-PRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNL--------MAVLQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDQPFAGVDPISVIDIKRIIEHL-RDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQDEHVKRVYLG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P33.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152598 for 1844 contacts (-82.8/contact) +
2D Compatibility (PS) -24353 + (NN) -6740 + (LL) 2808
1D Compatibility (HY) -12800 + (ID) 3400
Total energy: -197083.0 ( -106.88 by residue)
QMean score : 0.472
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