Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQQIQRDIAQALQVQPPFQSEADVQAQIARRIAFIQQCLKDSGLKT----LVLGISGGVDSLTAGLLAQRAVEQLREQTGDQAYRFIAVRLPYQVQQDEADAQASLATIRA--DEEQTVNIGPSVKALAEQLEALEGLEPAKSDFVIGNIKARIRMVAQYAIAGARGGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGLAKHQVRALARALGAPENLVEKIPTADLEDLRPGHPDEASHGVTYAEIDAFLHGQPLREEAARVIVDTYHKTQHKRELPKAP |
| 3FIU Chain:A ((18-247)) | ------------------------------------NWLSDSCMNYPAEGFVIGLSGGIDSAVAASLAVK--------TGLPT---TALILPSDNNQHQ-DMQDALELIEMLNIEHYTISIQPAYEAFLASTQSFT------QLVIKGNAQARLRMMYLYAYAQQYNRIVIGTDNACEWYMGYFTKFGDGAADILPLVNLKKSQVFELGKYLDVPKNILDKAPSAGLWQ---GQTDEDEMGVTYQEIDDFLDGKQVSAKALERINFWHNRSHHKRKLALTP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FIU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47809 for 1719 contacts (-27.8/contact) +
2D Compatibility (PS) -23759 + (NN) -12308 + (LL) 5900
1D Compatibility (HY) -14800 + (ID) 4450
Total energy: -97226.0 ( -56.56 by residue)
QMean score : 0.507
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