Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRVTLSRYLIEQTRSHNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQGEVQKKLDVMSNEILLEANEWAGNLAGMASEEMDHPYQIPGRYPKGAYLLVFDPLDGSSNIDVNVSVGTIFSVLRCPNEYLNQNDTLREEAFLQPGTTQVAAGYAIYGPQTMLMLTLGNGVKGFTLDRELGSFVLTHDNISVPESTAEFAINMSNQRHWEAPVKRYVEELLAGKEGPLGKNYNMRWIASMVADVHRILTRGGVFMYPRDAREPEKPGKLRLMYEANPMSFIIEQAGGAATNGTQRILDIKPENLHQRVAVFLGSKQEVERITGYHAE |
| 3IFA Chain:A ((11-325)) | ---LTLTRYVMEKGRQAKGTGELTQLLNSMLTAIKAISSAVRKAGLAHLYGIAGSVNV--DQVKKLDVLSNSLVINMLQSSYSTCVLVSEE-NKDAIITAKEKRGKYVVCFDPLDGSSNIDCLASIGTIFAIYRKTS------DEPSEKDALQCGRNIVAAGYALYGSATLVALSTGQGVDLFMLDPALGEFVLVEKDVKIKKKGKIYSLNEGYAKYFDAATTEYVQKKKFPEDG--SAPYGARYVGSMVADVHRTLVYGGIFLYPANQKSPK--GKLRLLYECNPVAYIIEQAGGLATTGTQPVLDVKPEAIHQRVPLILGSPEDVQ-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174821 for 2671 contacts (-65.5/contact) +
2D Compatibility (PS) -34039 + (NN) -21000 + (LL) 1296
1D Compatibility (HY) -26800 + (ID) 6600
Total energy: -261964.0 ( -98.08 by residue)
QMean score : 0.501
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