Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAFNMHNRNLLSLMHHSTRELRYLLDLSRDLK-RAKYTGTEQQHLKRKNIALIFEKTSTRTRCAFEVAAYDQGANVTYIDPNSSQIGHKESMKDTARVLGRMYDAIEYRGFKQEIVEELAKFAGVPVFNGLTDEYHPTQMLADVLTMREHSDKPLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTDVWVSMGEPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHCLPAFHNSETKVGKQIAEQYPNLANGIEVTEDVFESPYNIAFEQAENRMHTIKAILVSTLADI |
1OTH Chain:A ((3-311)) | ---QLKGRDLLTLKNFTGEEIKYMLWLSADLKFRIKQKGEYLPLLQGKSLGMIFEKRSTRTRLSTETGFALLGGHPCFLTTQDIHLGVNESLTDTARVLSSMADAVLARVYKQSDLDTLAKEASIPIINGLSDLYHPIQILADYLTLQEHYSS-LKGLTLSWIGDG-NNILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDTWISMGREEEK-KKRLQAFQGYQVTMKTAKVAASDWT-FLHCLP---------------RKPE-----EVDDEVFYSPRSLVFPEAENRKWTIMAVMVSLLTD- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OTH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151080 for 2726 contacts (-55.4/contact) +
2D Compatibility (PS) -33855 + (NN) -16199 + (LL) 2228
1D Compatibility (HY) -21200 + (ID) 6300
Total energy: -226406.0 ( -83.05 by residue)
QMean score : 0.703
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