Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGWRLLLTRPDEE----CAALAASLGEAGVHSSSLPLLAIDPLEETPEQRTLMLDLDRYCAVVVVSKPAARLGLERLDRYW------P----QPPQQTWCSVGAATAAILEAYGL-DVTYPEQGDDSEALLALPAFQDSLRVHDPKVLIMRGEGGREFLAERLRGQGVQVDYLPLYRRRAPDYPAGELLARV-RAERLNGLVVSSGQGLQNLYQLAAAD-WPEIGRLPLFVPSPRVAEMARELGAQRVIDCRGASAPALLAALTSAA |
| 1JR2 Chain:A ((1-258)) | ---MKVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLSFEFLSLP-SFSEKLSHPEDYGGLIFTSPRAVEAAELCLEQNNKTEVWERSLKEKWNAKSVYVVGNATASLVSKIGLDTEG-ET-CGNAEKLAEYICSRE---SSALPLLFPCGNLKREILPKALKDKGIAMESITVYQTVAHPGIQGNLNSYYSQQGVPASITFFSPSGLTYSLKHIQELSGDNIDQIKFAAIGPTTARALAAQGLPVSCTAESPTPQALATGIRKA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JR2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121770 for 1890 contacts (-64.4/contact) +
2D Compatibility (PS) -26959 + (NN) -13663 + (LL) 472
1D Compatibility (HY) -7600 + (ID) 2150
Total energy: -171670.0 ( -90.83 by residue)
QMean score : 0.548
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