Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVGQDVMRCLMALGLVLQGLSFGAQAAPGGAVELYRYVNDKGVVVLDRQGVPPQYIGKGYQVLNDQGRVIRTVPPAPTAEELRQRKAAQAQASSDAQLLRLYSSLEDVDRARERRLAELDGLSSVARGNLQSLKLQQANLQGQAANQERAGRPVAQALVDQLDDLKQEEKRLQGEIGRFQKAREDAERTYAADRARLSQLLGVSP |
3TNU Chain:A ((332-403)) | ---------------------------------------------------------------------------------------------------------------------------SELRRTMQNLEIELQSQLSMKASLENS-------LEETKGRYCMQLAQIQEMIGSVEEQLAQLRCEMEQQNQEYKILLD--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TNU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13038 for 283 contacts (46.1/contact) +
2D Compatibility (PS) -8402 + (NN) -5431 + (LL) 9020
1D Compatibility (HY) -3200 + (ID) 600
Total energy: 4425.0 ( 15.64 by residue)
QMean score : 0.533
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