Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIIRLDVILAKNKVRSKELAEAIGITEQNLSLLKNGKVKGIRLDTLEKICAFLDCQPGDILEYVADD
2LYL Chain:A ((1-66))
MIINNLKLIREKKKISQSELAALLEVSRQTINGIEKNKYNP-SLQLALKIAYYLNTPLEDIFQWQPE-
General information:
TITO was launched using:
RESULT:
Template:
2LYL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44823 for 460 contacts (-97.4/contact) +
2D Compatibility (PS) -7016 + (NN) -3505 + (LL) 128
1D Compatibility (HY) -5200 + (ID) 900
Total energy: -61316.0 ( -133.30 by residue)
QMean score : 0.737
(partial model without unconserved sides chains):
PDB file :
Tito_2LYL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LYL-query.scw
PDB file :
Tito_Scwrl_2LYL.pdb
: