Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSALVGVIMGSKSDWSTLSHTADMLDKLGIPYEVKVVSAHRTPDLLFQYAEEAEGRGLEVIIAGAGGAAHLPGMCAAKTHLPVLGVPVQSSMLSGVDSLLSIVQMPAGVPVATLAIGKAGAVNAALLSASILGAKHPQYHEALKQFRANQTETVLDNPDPRDA
2FWI Chain:A ((24-179))
---VVGIIMGSQSDWETMRHADALLTELEIPHETLIVSADRTPDRLADYARTAAERGLNVIIAGAGGAAHLPGMCAAWTRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAIGASGAKNAALLAASILALYNPALAARLETWRALQTASVPNSPI----
General information:
TITO was launched using:
RESULT:
Template:
2FWI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131774 for 1298 contacts (-101.5/contact) +
2D Compatibility (PS) -17007 + (NN) -6681 + (LL) 352
1D Compatibility (HY) -15600 + (ID) 4900
Total energy: -175610.0 ( -135.29 by residue)
QMean score : 0.603
(partial model without unconserved sides chains):
PDB file :
Tito_2FWI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FWI-query.scw
PDB file :
Tito_Scwrl_2FWI.pdb
: