Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKILIVNSIYYTEIANLLLEGATDKLKGSNASY-NVIEVPGAFEIPAAILFAVKSKHFNYDGYLALGCVIRGETDHYQYICKGVIKGLNEVVMHNTVPLGMGVITADSKDKALVRAD--KDKKNIGGRTASAVLHMIDLYNKLR
2C92 Chain:A ((17-157))
GVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELA----RNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELR
General information:
TITO was launched using:
RESULT:
Template:
2C92.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122066 for 1165 contacts (-104.8/contact) +
2D Compatibility (PS) -14931 + (NN) -9765 + (LL) 144
1D Compatibility (HY) -4000 + (ID) 2300
Total energy: -152918.0 ( -131.26 by residue)
QMean score : 0.518
(partial model without unconserved sides chains):
PDB file :
Tito_2C92.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2C92-query.scw
PDB file :
Tito_Scwrl_2C92.pdb
: