Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----MSLGVIAAAIAVGLGALGAGIGNGLIVSKTVEGVARQPEARSMLQSIMFVGVALVEALPIIAVVIAFMVLNK--
1C0V Chain:A ((1-79))
MENLNMDLLYMAAAVMMGLAAIGAAIGIGILGGKFLEGAARQPDLIPLLRTQFFIVMGLVDAIPMIAVGLGLYVMFAVA
General information:
TITO was launched using:
RESULT:
Template:
1C0V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41721 for 459 contacts (-90.9/contact) +
2D Compatibility (PS) -7489 + (NN) -4342 + (LL) 0
1D Compatibility (HY) -10000 + (ID) 1500
Total energy: -65052.0 ( -141.73 by residue)
QMean score : 0.245
(partial model without unconserved sides chains):
PDB file :
Tito_1C0V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C0V-query.scw
PDB file :
Tito_Scwrl_1C0V.pdb
: