Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRP------VAGDFTPAAEIVKDGDDAVVRLELPGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIR-YGSFRRSFRLPAHVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAITK
4ELD Chain:A ((45-161))
------------------------------------VAAGIQISGKGFMPISIIEGDQHIKVIAWLPGVN-KEDIILNAVGD----TLEIRAKRSPLMITES---ERIIYSEIPEEEEIYRTIKLPATVKEENASAKFENGVLSVILPKAESSI----KKGINIE-
General information:
TITO was launched using:
RESULT:
Template:
4ELD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45325 for 684 contacts (-66.3/contact) +
2D Compatibility (PS) -11690 + (NN) -2324 + (LL) 2708
1D Compatibility (HY) -6000 + (ID) 1300
Total energy: -63931.0 ( -93.47 by residue)
QMean score : 0.483
(partial model without unconserved sides chains):
PDB file :
Tito_4ELD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ELD-query.scw
PDB file :
Tito_Scwrl_4ELD.pdb
: