Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MINQKKIAGEKACEWIKDGMVVGLGTGSTVYYTIEKLGEMVNN-GLHITGVATSEETNKQAQNLGIPLKSLNDVTEIDITIDGADEIDTDFQGIKGGGGALLREKMVASASLKNIWVVSEEKLVRNLGKFPLPLEVIPFGWKQVERKLEKEHIQTNLRKQSSGEVYVTNNGNYILDIVNQTFTDAEMWQEKLAQIPGIVEHGLFLHYVDIIICAKANGEIELIKK |
3L7O Chain:A ((2-224)) | -EELKKIAGVRAAQYVEDGMIVGLGTGSTAYYFVEEVGRRVQEEGLQVIGVTTSSRTTAQAQALGIPLKSIDEVDSVDVTVDGADEVDPNFNGIKGGGGALLMEKIVGTLTKDYIWVVDESKMVDTLGAFRLPVEVVQYGAERLFREFEKKGYKPSFREY-DGVRFVTDMKNFIIDLDLGSIPDPIAFGNMLDHQVGVVEHGLFNGMVNRVIVAG---VRILEAN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L7O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96248 for 1900 contacts (-50.7/contact) +
2D Compatibility (PS) -23802 + (NN) -7021 + (LL) 72
1D Compatibility (HY) -20800 + (ID) 5000
Total energy: -152799.0 ( -80.42 by residue)
QMean score : 0.557
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