Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQALLFLMALLLPSRAGAEEIIGGVESEPHSRPYMAYVNTFSKKGYVAICGGFLIAPQFVMTAAHCSGRRMTVTLGAHNVRKRECTQQKIKVEKYILPPNYNVSSKFNDIVLLKLKKQANLTSAVDVVPLPGPSDFAKPGTMCWAAGWGRTGVKKSISHTLREVELKIVGEKACKIFRHYKDSLQICVGSSTKVASVYMGDSGGPLLCAGVAHGIVSSGRGNAKPPAIFTRISPHVPWINRVIKGE
1KLT Chain:A ((1-226))
--------------------IIGGTESKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCAGRSITVTLGAHNITEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQACSHFRDFDHNLQLCVGNPRKTKSAFKGDSGGPLLCAGVAQGIVSYGRSDAKPPAVFTRISHYRPWINQILQAN
General information:
TITO was launched using:
RESULT:
Template:
1KLT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -165665 for 1911 contacts (-86.7/contact) +
2D Compatibility (PS) -24512 + (NN) -8383 + (LL) 2268
1D Compatibility (HY) -19200 + (ID) 6350
Total energy: -221842.0 ( -116.09 by residue)
QMean score : 0.555
(partial model without unconserved sides chains):
PDB file :
Tito_1KLT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KLT-query.scw
PDB file :
Tito_Scwrl_1KLT.pdb
: