Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTALNVLIYPDDHLKVVCEPVTKVNDAIRKIVDDMFDTMYQEKGIGLAAPQVDILQRIITIDVEGDKQNQFVLINPEILASEGETGIEEGCLSIPGFRALVPRKEKVTVRALDRDGKEFTLDADGLLAICIQHEIDHLNGILFVDYLSPLKRQRIKEKLIKYKKQIAKS
4AL2 Chain:A ((1-162))
-SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD------
General information:
TITO was launched using:
RESULT:
Template:
4AL2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102604 for 1243 contacts (-82.5/contact) +
2D Compatibility (PS) -17065 + (NN) -3576 + (LL) 776
1D Compatibility (HY) -19600 + (ID) 5400
Total energy: -147469.0 ( -118.64 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_4AL2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4AL2-query.scw
PDB file :
Tito_Scwrl_4AL2.pdb
: