Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTVTVKDLVIGTGAPKIIVSLMAKDIASVKSEALAYREADFDILEWRVDHYADLSNVESVMAAAKILRETMPEKPLLFTFRSAKEGGEQAISTEAYIALNRAAIDSGLVDMIDLELFTGDDQVKETVAYAHAHDVKVVMSNHDFHKTPEAEEIIARLRKMQSFDADIPKIALMPQSTSDVLTLLAATLEMQEQYADRPIITMSMAKTGVISRLAGEVFGSAATFGAVKKASAPGQISVNDLRTVLTILHQA
3LB0 Chain:A ((25-275))
MKTVTVRDLVVGEGAPKIIVSLMGKTITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQHNVAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIPKIAVMPQTKADVLTLLTATVEMQERYADRPIITMSMSKTGVISRLAGEVFGSAATFGAVKKASAPGQISVADLRTVLTILHQ-
General information:
TITO was launched using:
RESULT:
Template:
3LB0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -142231 for 2199 contacts (-64.7/contact) +
2D Compatibility (PS) -27236 + (NN) -8800 + (LL) 144
1D Compatibility (HY) -32800 + (ID) 10050
Total energy: -220973.0 ( -100.49 by residue)
QMean score : 0.612
(partial model without unconserved sides chains):
PDB file :
Tito_3LB0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LB0-query.scw
PDB file :
Tito_Scwrl_3LB0.pdb
: