Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEEPQPPRPPASMALLGSQHSGAPSAAGPPGGTSSAATAAVLSFSTVATAALGNLSDASGGGTAAAPGGGGLGGSGAAREAGAAVRRPLGPEAAPLLSHGAAVAAQALVLLLIFLLSSLG---NCAVMGVIVKHRQLRTVTNAFILSLSLSDLLTALLCLPAAFLDLFTPPGGSAPAAAAGPWRGFCAASRFFSSCFGIVSTLSVALISLDRYCAIVRPPRE-KIGRRRALQLLAGAWLTALGFSLPWELLGAPREL-AAAQSFHGCLYRTSPDPAQLGAAFSVGLVVACYLLPFLLMCFCHYHICKTVRLSDVRVRPVNTYARVLRFFSEVRTATTVLIMIVFVICCWGPYCFLVLLAAARQAQTMQAPSLLSVVAVWLTWANGAINPVIYAIRNPNISMLLGRNREEGYRTRNVDAFLPSQGPGLQARSRSRLRNRYANRLGACNRMSSSNPASGVAGDVAMWARKNPVVLFCREGPPEPVTAVTKQPKSEAGDTSL |
| 3CAP Chain:A ((44-310)) | ----------------------------------------------------------------------------------------------------------------MFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTT---LYTSLHGYFVFGPTG-----CNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAP-PLVGWSRYIPEGMQCSCGIDYYT-PHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQK-----AEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDF-GPIFMTIPA-FFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN--------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CAP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -211711 for 1989 contacts (-106.4/contact) +
2D Compatibility (PS) -26496 + (NN) -8189 + (LL) 9032
1D Compatibility (HY) -26000 + (ID) 3450
Total energy: -266814.0 ( -134.14 by residue)
QMean score : 0.298
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