Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNGVSEGTRGCSDRQPGVLTRDRSCSRKMNSSGCLSEEVGSLRPLTVVILSASIVVGVLGNGLVLWMTV-FRMARTVSTVCFFHLALADFMLSLSLPIAMYYIVSRQWLLGEWACKLYITFVFLSYFASNCLLVFISVDRCISVLYPVWALNHRTVQRASWLAFGVWLLAAALCSAHLKFRTTRKWNGCTHCYLAFNSDNETAQIWIEGVVEGHIIGTIGHFLLGFLGPLAIIGTCAHLIRAKLL--REGWVHANRPKRLLLVLVSAFFIFWSPFNVVLLVHLWRRVMLKEIYHPRMLLILQASFALGCVNSSLNPFLYVFVGRDFQEKFFQSLTSALARAFGEEEFLSSCPRGNAPRE |
| 4RWA Chain:A ((130-404)) | --------------------------------------------------SAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQFPS---PSWYW-------DTVTKICVFLFAFVVPILIITVCYGLMLL---GSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIV--WTLVDIDR-RDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLC------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -249975 for 1982 contacts (-126.1/contact) +
2D Compatibility (PS) -26716 + (NN) -6924 + (LL) 4444
1D Compatibility (HY) -30000 + (ID) 4500
Total energy: -313671.0 ( -158.26 by residue)
QMean score : 0.252
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