Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDSPSNATVPCGFLLQGFSEFPHLRPVLFLLLLGVHLATLGGNLLILVAVASMPSRQPML-LFLCQLSAIELCYTLVVVPRSLVDLSTPGHRRGSPISFLSCAFQMQMFVALGGAECFLLAAMAYDRYVAICHPLRYAAVVTPGLCARLALACCLRGLAVSVGLTVAI--------FHLPFCGSRLLLHFFCDITALLHLACTRSYADELPLLGACLVLLLLPSVLILASYGAI-AAALRRLR------CPKGRGKAASTCALHLAVTF-------------LH-YGCATFMYVRPRASYSPRLDRTLALVYTNVTPLLCPLIYSLRNREITAALSRVLGRRRPGQAPGGDLREL |
| 3PWH Chain:A ((23-303)) | -----------------------------------------GNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLAIPFA-ITIST-----GFCAACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWV--LSFAIGLTPMLGWNNCGQP----GCGEGQVACLFEDVVPMNYMVYFNFFA-----------CVLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTFFC--PDCSHAPLWLMYLAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PWH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -220669 for 1760 contacts (-125.4/contact) +
2D Compatibility (PS) -24904 + (NN) -8633 + (LL) 3592
1D Compatibility (HY) -26000 + (ID) 3700
Total energy: -280314.0 ( -159.27 by residue)
QMean score : 0.279
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