Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFFIIHSLVTSVFLTALGPQNRTMHFVTEFVLLGFHGQREMQSCFFSFILVLYLLTLLGNGAIVCAVKLDRRLHTPMYILLGNFAFLEIWYISSTVPNMLVNILSEIKTISFS--------GCFLQFYFFFSLGTTECFFLSVMAYDRYLAICRPLHYPSIMTGKFCIILVCVCWVGGFLCYPVPIVLISQ--LPFCGPNIIDHLVCDPGPLFALACISAPSTELICYTFNSMIIFGPFLSILGSYTLVIRAVLC---------IPSGAGRT---KAFSTCGSHLMVVSLFYGTLMVMYV-------SPTSGNPAGMQKIITLVYTAMTPFLNPLIYSLRNKDMKDALKRVLGLTVSQN |
| 3REY Chain:A ((7-303)) | ------------------------------------------SVYITVELAIAVLAILGNVLVCWAVWLNSNLQN-----VTNY-----FVVSLAAADILVGVLAIPFAITISTGFCAACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIGLTPMLGWNNCGQP----------GCGEGQVACLFEDVVPMNYMVYFNFFACVLV-PLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3REY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -242989 for 1975 contacts (-123.0/contact) +
2D Compatibility (PS) -25959 + (NN) -4219 + (LL) 5628
1D Compatibility (HY) -28000 + (ID) 3200
Total energy: -298739.0 ( -151.26 by residue)
QMean score : 0.248
|
|
|