Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVSANQTASVTEFILLGLSAHPKLEKTFFVLILLMY-----LVILLGNGVLILMTVSNSHLHMPMYFFLGNLSFLDICYTTSSVPLILDSFLTPRKTISFSACAVQMFLSFAMGATECVLLSMMAFDRYVAICNPLRYPVVMSKAAYMPIRLPAPG
4MQT Chain:A ((36-150))
-------------------------KTFEVVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWV
General information:
TITO was launched using:
RESULT:
Template:
4MQT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55493 for 623 contacts (-89.1/contact) +
2D Compatibility (PS) -11452 + (NN) -8124 + (LL) 2128
1D Compatibility (HY) -13600 + (ID) 1450
Total energy: -87991.0 ( -141.24 by residue)
QMean score : 0.097
(partial model without unconserved sides chains):
PDB file :
Tito_4MQT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MQT-query.scw
PDB file :
Tito_Scwrl_4MQT.pdb
: