Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGENQTMVTEFLLLGFLLGPRIQMLLFGLFSLFYIFTLLGNGAILGLISLDSRLHTPMYFFLSHLAVVDIAYTRNTVPQMLANLLHPAKPISFAGCMTQTFLCLSFGHSECLLLVLMSYDRYVAICHPLRYSVIMTWRVCITLAVTSWTCGSLLALAHVVLILRLPFSGPHEINHFFCEILSVLRLACADTWLNQVVIFAACVFF--LVGPPSLVLVSYSHILAAI--LRIQSGEG------RRKAFSTCSSHLCVVGLFFGSAIIMYMAPKSRHPEEQQKVFFLFY----SFFNPTLNPLIYSLRNGEVKGALRRALGKESHS |
| 4EA3 Chain:A ((121-405)) | ------------------PLGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVLL-TLPFQGTDILLGFWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHP-------TSSKAQAVNVAIWALASVVGVPVAIM-------GSAQVEDEEIECLVEIPTP-QDYW---GPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLLSGSREKDRNLRRITRLVLVVVAVFVGCWTPVQVFVLAQGLGVQPSSETAVAILRFCTALGYVNSCLNPILYAFLDENFKACFR--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194474 for 1957 contacts (-99.4/contact) +
2D Compatibility (PS) -26584 + (NN) -6951 + (LL) 3920
1D Compatibility (HY) -22000 + (ID) 3200
Total energy: -249289.0 ( -127.38 by residue)
QMean score : 0.266
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