Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDGVNDSSLQGFVLMGISDHPQLEMIFFIAILFSYLLTLLG---NSTIILLSRLEARLHTPMYFFLSNLSSLDLAFATSSVPQMLINLWGPGKTISYGGCITQLYV----FLWLGATECIL---------------LVVMAFDRYVAVCRPL------RYTAIMNPQLCWLLAVIACLGGLGNSVIQSTFTLQLPLCGHRRVEGFLCEVPAMIKLACG-------DTSLNQAVLNGVCTFFTAVPLSIIVISYCLIAQAVLKIRSAEGRRKAFNTCLS--------------HLLVVFLFYGSASYGYLLPAKNSKQDQGKF---ISLFYSLVTPMVNPLIYTLRNMEVKGALRRLLGKGREVG |
| 3C9L Chain:A ((43-326)) | --------------------------------YMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLF-------------------MVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMA-LACAAP--------------PLVGWSRY------IPEGMQCSCGIDYYTPHEETNNESFV--IYMFVVHFIIPLIVIFFCY-GQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAF-YIFTHQGS--DFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNDD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C9L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151228 for 1559 contacts (-97.0/contact) +
2D Compatibility (PS) -24108 + (NN) -6164 + (LL) 4972
1D Compatibility (HY) -29200 + (ID) 3600
Total energy: -209328.0 ( -134.27 by residue)
QMean score : 0.254
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