Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIANNTVVTEFILLGLTQSQDIQLLVFVLILIFYLIILPGNFLIIFTIRSDPGLTAPLYLFLGNLAFLDASYSFIVA-PRMLVDFLSEKKVISYRGCITQLFFLHFLGGGEGLLLVVMAFDRYIAICRPLHCSTVMNPRACYAMMLALWLGGFVHSIIQVVLILRLPFCGPNQLDNFFC----DVRQVIKLACTDMFVVELLMVFNSGLMTLLCFLGLLASYAVILCHVR--------------RAASEGKNKAMSTCTTRVIII---LLMFGP-AIFIYMCPFRAL----PADKMVSLFHTVIFPLMNPMIYTLRNQEVKTSMKRLLSRHVVCQVDFIIRN |
| 4WW3 Chain:A ((56-328)) | -----------------------------------------------------SLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFG------WGAYTLEGVLCNCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMS---VSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQFDDKET |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WW3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -182273 for 1793 contacts (-101.7/contact) +
2D Compatibility (PS) -24530 + (NN) -2971 + (LL) 6512
1D Compatibility (HY) -22800 + (ID) 2850
Total energy: -228912.0 ( -127.67 by residue)
QMean score : 0.265
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