Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKEQDSNVTEFVLLGLSSSWELQLFLFLLFLFFYIAIVLGNLLIVVTVQAHAHLLQSPMYYFLGHLSFIDLCLSCVTVPKMLGDFLQQGKSISFSGCLAQIYFLHFLGASEMFLLTVMAYDRYVAICNPLRYLTVMNPQLCLWLVLACWCGGFIHSIMQVILVIQLPFCG-PNELDNFY-CDVPQVIKLACM--DTYVVEVLVIANSGLLSLVCFLVLLFSYAIILITLRTHFCQGQN------KVFST------CASHLTVVSLIFVPC--------VFIYLRPFCSFSVDKIFSLFYTVI----TPMLNPLIYTLRNTDMKTAMKKLRIKPCGIPLPC |
| 3PWH Chain:A ((21-302)) | --------------------------------------ILGNVLVCWAVWLNSNL-QNVTNYFVVSLAAADILVGVLAIPFAIT--ISTGFCAACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSF---AIGLTPMLGWNNCGQP-------GCGEGQV---ACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTFFCPDCSHA--PLWLMYLAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PWH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -265666 for 1807 contacts (-147.0/contact) +
2D Compatibility (PS) -24202 + (NN) -3647 + (LL) 5516
1D Compatibility (HY) -25200 + (ID) 3400
Total energy: -316599.0 ( -175.21 by residue)
QMean score : 0.359
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