Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLGIMAWNATCKNWLAAEAALEKYYLSIFYGIEFVVGVLGNTIVVYGYIFSLKNWNSSNIYLFNLSVSDLAFLCTLPMLIRSYANG-NWIYGDVLCISNRYVLHANLYTSILFLTFISIDRYLIIKYPFREHLLQKKEFAILISLAIWVLVTLELLPILPLINPVITDNGT-TCNDFASSGDPNYNLIYSMCLTLLGFLIPLFVM--CFFYYKIALFLKQRNRQVATA-----------------------------LPL-----------EKPLN-----LVIMAVVIFSVLFTPYHVMRNVRIASRLGSWKQYQCT-QVVINSFYIVTRPLAFLNSVINPVFYFLLGDHFRDMLMNQLRHNFKSLTSFSRWAHELLLSFREK |
4XNW Chain:A ((45-382)) | -----------------KTGFQFYYLPAVYILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYPLKSLGRLKKKNAICISVLVWLIVVVAISPILFYSGTGVRKNKTITCYDTTSDEYLRSYFIYSMCTTVAMFCVPLVLILGCYGLIVRALIYKMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIPDDWVCPLCGVGKDQFEEVEEPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDFQTPAMCAFNDRVYATYQVTRGLASLNSCVNPILYFLAGDTFRRR----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XNW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -228738 for 2128 contacts (-107.5/contact) +
2D Compatibility (PS) -28862 + (NN) -52 + (LL) 4284
1D Compatibility (HY) -36800 + (ID) 5550
Total energy: -295718.0 ( -138.97 by residue)
QMean score : 0.274
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