Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVGDTLKLLSPLMTRYFFLLFYSTDSSDLNENQHPLDFDEMAFGKVKSGISFLIQTGVGILGNSFLLCFYNLILFTGHKLRPTDLILSQLALANSMVLFFKGIPQTMAAFGLKYLLNDTGCKFVFYYHRVGTRVSLSTICLLNG--FQAIKLNPSICRWMEIKIRSPRFIDFCCLLCWAPHVLMNASVLLLVNGPLNSKNSSAKNNYGYCSYKASKRF--SSLHAVLYFSPDFMSLGFMVWASGSMVFFLYRHKQQVQHNHS------------------------------------------------------------------------------------------------------------------------------------------------------NRLSCRPSQEARATHTIMVLVSSFFVFYSVHSFLTIWTTVVA-----------NPGQWIVTNSVLVASCFPARSPFVLIMSDTHISQFCFACRTRKTLFPNLVVMP |
| 3ODU Chain:A ((45-497)) | -----------------------------------------NFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQ---KKLRSMTDKYRLHLSVADLLFVI-T-LPFWAVDAVANWYFGNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIV-HATNSQ----RPRKLLAEKVVYVGVWIPALLLTIPDFIFANVSEA-------DDRYICDRFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSGSNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGSKGHQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKFKTSAQHALTSGRPLEVLFQ-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ODU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136297 for 2019 contacts (-67.5/contact) +
2D Compatibility (PS) -28371 + (NN) 3878 + (LL) 3580
1D Compatibility (HY) -14800 + (ID) 1800
Total energy: -173810.0 ( -86.09 by residue)
QMean score : 0.074
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