Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKLVIIENMAEIMLFSLDLLLFSTDILCFNFPSKMIKLPGFITIQIFFYPQASFGISANTILLLFHIFTFVFSHRSKSIDMIISHLSLIHILLLFTQAILVSLDFF-GSQNTQDDLRYKVIVFLNKVMRGLSICTPCLLSVLQAIIS-PS-IFSLAKLKHPSASHILGFFLFSWVLNMFIGVIFCCTLRLPPVKRGQSSVCHTALFLFAHELH-PQ--E-TVFHTNDFEGCHLYRVHGPLKRLHGDYFIQTIR-GYLSAFT--Q--------------------------------P-----------------------------------------------------------------------------------------------------------------------ACPRVSPVKRASQAIL-LLVSFVFTYWVDFTFSFSGGVTWI-NDSLLVWLQVIVANSYAAISPLMLIYADNQIFKTLQMLWFKYLSPPKLMLKFNRQCGSTKK |
| 3RZE Chain:A ((9-443)) | ------------------------------------------MPLVVVLSTICLVTVGLNLLVLYAVRSE---RKLHTVGNLYIVSLSVADLIVGAVV-MPMNILYLLMSKWSLGRPLCLFWLSMDYVASTASIFSVFILCIDRYRSVQQPLRYL----KYRTKTRASATILGAWFLSFLWVIPILGWNH------------------RREDKCETDFYDVTWFKVMTAIINFYL----PTLLMLWFYAKIYKAVRQHCNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYLHMNRERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKNCCNEHLHMFTIWLGYINSTLNPLIYPLCNENFKKTFKRILHI-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RZE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -197858 for 1885 contacts (-105.0/contact) +
2D Compatibility (PS) -27132 + (NN) -5299 + (LL) 7488
1D Compatibility (HY) -14800 + (ID) 1400
Total energy: -239001.0 ( -126.79 by residue)
QMean score : 0.248
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