Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCFMFLEFLFSTLFIMLIMVLSVFQIILVVILVILVLLQPPGSSSLSGFSNSQ--QGFNSIIPVKSSANPLNKITAIVAGLFIMNTLLLSGLCSKDVHKKSIAEKIILEKQQENESTSVPFEN
3DL8 Chain:E ((8-72))
-----------------------LFVIIAVVLIISTLLQKGRG-DVGAAFGGGMGQSI---FGVGGVETILTKATYWLGALFLVLALLLSVI-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3DL8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18852 for 314 contacts (-60.0/contact) +
2D Compatibility (PS) -6706 + (NN) -3024 + (LL) 5580
1D Compatibility (HY) -8400 + (ID) 250
Total energy: -31652.0 ( -100.80 by residue)
QMean score : 0.138
(partial model without unconserved sides chains):
PDB file :
Tito_3DL8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DL8-query.scw
PDB file :
Tito_Scwrl_3DL8.pdb
: