Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKPDIINPNFSVWVNASAGTGKTKILIDRVLRLLLENKRNIFCLTFTNAAANEMESRIHNILSKWAVCSDNELIASLEQLDLSLLLLQHHYPPSHPFLSSQCLTLRSRWPQTKNSEVFNHYLIQARRLFSELENLDLTIQTVHAFCYKLISSFPAEAGIVPNCTLSECKELHSIVFDKLLHNEAVQDSIKFIAAEVDENKLRDLLYTLCIKRSVSANNLEYVKGKLSAPDEIHGLQSEATEQIERLAEILSKGSKRDRNYSKMLDLTSSSFIQVADTRIQKLDSSATRWNDISIENLVKVFLKSESCEKKSISSIITKSTLEKFPGAEQVIENIQNAVFT-----HVRDINSYQIFKRTSSFLDIFKVYIDLYNSEKSKNALLDYNDIIDLATNLLSNPDYKN-----WVLFNLDQKIDHILVDEAQDNSISQWKIIANLCDEFFIRNDEKRTLFVVGDVKQSIYRFQGANPHLFNCMQQYFHTKSGGKDWISCQLEKSFRSTPETLTLVDRLFNNFREEISFVDSEIKHIPYRENDQGYVEIWPLLPRCKEEEQQALQIHLMHRKDYIITDRLLAQAIAHKIHNWLNEG-RILVAK---NRHIEPRDIMILVRQRNMLVDYVISELKKANIPVVG---RDYFRIMDYIAVQDLIALTEFLLL--PTNDLALANALKSPLFNFTEDDLFNIAYDRKEQSLWERLQNY------SEDIYSKLNDLIN-------LSHIESPLTLFTHILRTGK-KKFAARL--GLECFEVLDEFMNLVLQFENPSLQAFVQWIK--ENNPEIKNDMQSER--NAVRIMTIHKSKGLQAPIVFLV----DTNTVPKNSESIVLD---AMGAPFLCGKNNNAYCD----QVKREKKLEDYNEYLRLLYVALTRAEDELYILGKEPVQKGSWYDIITKYGEPYEKKYMELHQIFKEKVEVLCVNANYPYIYKKRDYFNIPAVLPPPNLSILFQHSPSPSQYPLLSPQCFDTGIHSFSPLDSSVTHWDDKKRNTWMTDGYTRGLIIHSILQYMPKIEKDRRKNWIGKYLDNINIRKNKDEIYRKILAFNEKYDYLFDLDGKSEITLSGTINGKPVLVRLDKLCITQDKAIIIDYKSHRNVSVSSLNEIKKQMLIYKTLVQEICPNKQVECMVIWVEDLTIQSDF |
| 3U4Q Chain:A ((311-882)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAKKLLEKLKTDYFTRSPEQHLKSLAEMKPVIET--LVQLVISYGKRFEAAKQEKSIIDFSDLEHYCLAILTAEND--REPSEAARFYQEQ-FHEVLVDEYQDTNLVQESILQLVTS----GPEETGNLFMVGDVKQSIYRFRLAEPLLFLSKYKRF-TESGEGTGRKIDLNKNFRSRADILDSTNFLFKQ------LMGGKIGEVDY--DEQAELKLGAAYPDNDETETELLLID-------LETVQFEAKAIAKEIRKLISSPFKVY---KKTHRNIQYRDIVILLRSMPW-APQIMEELRAQGIPVYANLTSGYFE-----AVEVAVALSVLKVIDNPYQDIPLASVLRSPIVGADENELSLIRLENKKAPYYEAMKDYLAAGDRSDELYQKLNTFYGHLQKWRAFSKNHSVSELIWEVYRDTKYMDYVGGMPGGKQRQANLRVLYDRARQYESTAFRGLFRFLRFIERMQERGD------QEDVVRLMTIHSSKGLEFPVVFVAGLGRNFNMMDLN-KSYLLDKELGFGTKYIHPQLRISYPTLPLIAMKKKMRRELLSEELRVLYVALTRAKEKLFLIGSCKDHQKQLAKWQASASQTDWLLPEFDRYQARTYLDFIGPALARHRHADISGHPARFAVQMIHSYDSERLEAIRRGEPVFAFDEKAREQLSWTYPHQEVTQIRTKQSVSDEYSGRYRRPAFMMKKGLTAAEKGTAMHTVMQHIPLSHVPSIEEAEQTVHRLYEKELLTEEQKDAIDIEEIVQFFHTEIGGQLIGAKWKDREIPFSLALPAKEIYPDAHEADEPLLVQGIIDCLYETEDGLYLLAYKSDRIEGGFEGAAPI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U4Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204225 for 3323 contacts (-61.5/contact) +
2D Compatibility (PS) -52701 + (NN) -26143 + (LL) 28112
1D Compatibility (HY) -41200 + (ID) 7450
Total energy: -303607.0 ( -91.37 by residue)
QMean score : 0.420
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