Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKSQLVKKVFDSVAYRYDIMNDIISLGIHRLWKDKMVNSVHFTK--NSQV----LDVAGGTGDIAIRIVRREPS------VQVTVCDINQNMLSRGRNKAINSNQL----NFNWVCANAESLPFEDSEF-DCCTIAFGIRNVSDRKKALSEIHRVLKPNGQFICLEFAPMHYKNEIFTKLYDLYSLKVIPKIGNIVTKDESPYQYLVRSIREFPVQTDFKMEIEEVGFKKVKFHNMSYGIVALHTGTK
4OBX Chain:A ((23-256))------------SVANRYDLMNDVMSLGIHRLWKDHFINKLDAGKRPNSTTPLNFIDVAGGSGDIAFGLLDHAESKFGDTESTMDIVDINPDMLKEGEKRAMEQGKYFKDPRVRFLVSNGEKLEEIDSDSKDIYTVSFGIRNFTDIQKGLNTAYRVLKPGGIFYCLEFSKI--ENPLMDFAYQQWA-KVLPVMGSMIANDYDSYQYLVESIERFPDQETFKSMIEKAGFKSAGYESLTFGICAIHWGIK


General information:
TITO was launched using:
RESULT:

Template: 4OBX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120747 for 1721 contacts (-70.2/contact) +
2D Compatibility (PS) -23476 + (NN) -2381 + (LL) 1340
1D Compatibility (HY) -23200 + (ID) 4800
Total energy: -173264.0 ( -100.68 by residue)
QMean score : 0.384

(partial model without unconserved sides chains):
PDB file : Tito_4OBX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4OBX-query.scw
PDB file : Tito_Scwrl_4OBX.pdb: