Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGNIKTISVKDNNVRLDRYIRRIFPNLKQSVIEKSLRRGLIKVNDCKAKSSDRVNSGQIITIKYLDYIENANSDCKHNEKLVELLRSNILYEDEYILAINKPAGVIVQGGIKVKISISDLLDQVR-EGETFKIVHRLDRDTSGAIIFARNANVARYLMEEFKGRRVKKTYLALTSGIPSKNRGVIDYPLVKKYVSGQEKVVIDKNSPQDATTRFSIIAKFKLNKPLVQRPIIQVADTQLYEHCNLSLSRVCHLSSLSSCYSSALLCHLSAPILVSSKTDHKQAHYTTFSIKKLDSSIMCRNDTRSVAYLKLQPITGRTHQLRTHLAYINCPILGDGKYGGKKAFVDGIASKIHLHSYSLSLKLPNNKKITITAPLPEHIKKSIEALHTPF |
| 1V9K Chain:A ((4-137)) | ----------------------------------------------------------------------------------------IMYEDDHILVLNKPSGTAVHGGSGLSFGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREKGMQKDYLALVRGQWQSHVKSVQAPLLKNILQSGERIVRVSQEGKPSETRFKVEERYAFATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFDRQLTEAGTGLNRLFLHAAALKFTHPGTGEVMRIEAPMDEGLKRCLQKMRNAR----------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V9K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46676 for 741 contacts (-63.0/contact) +
2D Compatibility (PS) -14408 + (NN) -5730 + (LL) 11252
1D Compatibility (HY) -9200 + (ID) 2200
Total energy: -66962.0 ( -90.37 by residue)
QMean score : 0.375
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