Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVEQKDKYRPCVGIMLFNKQGHVFIGKRFDSDSYWQMPQGGIDDGEKLEQAALRELLEEVGTDK--AKIIAKNKDWIYYNLPEEVI--PTCWNGRYSGQKQRWFLMKFYGEGKDININYTDHPEFKEWRWQSVDNLVAGAIPFKKEVYKTVIEEFSSQIKVSIIK
4S2X Chain:A ((6-156))
-----DGYRPNVGIVICNRQGQVMWARRFGQHS-WQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLVRKPVC-----IGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLAA-
General information:
TITO was launched using:
RESULT:
Template:
4S2X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60924 for 1036 contacts (-58.8/contact) +
2D Compatibility (PS) -15527 + (NN) -6947 + (LL) 940
1D Compatibility (HY) -16800 + (ID) 3300
Total energy: -102558.0 ( -98.99 by residue)
QMean score : 0.462
(partial model without unconserved sides chains):
PDB file :
Tito_4S2X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4S2X-query.scw
PDB file :
Tito_Scwrl_4S2X.pdb
: