Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQKQYNLGKSLKCKKKSLLTKVKNLLRFQEEKKSVDEKSRDIAKPREIKSEKSIDNKKNELVIAKIY
1BY6 Chain:A ((45-53))
-----------------------------------VDEKLRDLY------------------------
General information:
TITO was launched using:
RESULT:
Template:
1BY6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 385 for 20 contacts (19.2/contact) +
2D Compatibility (PS) -878 + (NN) 14 + (LL) 4528
1D Compatibility (HY) -800 + (ID) 300
Total energy: 2949.0 ( 147.45 by residue)
QMean score : 0.448
(partial model without unconserved sides chains):
PDB file :
Tito_1BY6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BY6-query.scw
PDB file :
Tito_Scwrl_1BY6.pdb
: