Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKYNNIVKCPIITEKASFLREKFNKYSLYVFVNVNKHKIKSAIESLFNVKVSSINVVRVKPKYRRFKGVVGYEKKKKKVYFSLMDGQKLDIMSV
2VRH Chain:B ((10-94))
------VLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNLDFVGG
General information:
TITO was launched using:
RESULT:
Template:
2VRH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 416259 for 3240 contacts (128.5/contact) +
2D Compatibility (PS) -8365 + (NN) 3834 + (LL) 408
1D Compatibility (HY) 1200 + (ID) 1200
Total energy: 412136.0 ( 127.20 by residue)
QMean score : ?
(partial model without unconserved sides chains):
PDB file :
Tito_2VRH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VRH-query.scw
PDB file :
Tito_Scwrl_2VRH.pdb
: