Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYKKEDENITEQVNLKWKGEFKKSINKTHKKFETFLPSQKFLAYSTKDNNFNIRFENKEELIKISDVLRANNED
1BIF Chain:A ((76-121))
------------------GQYRRDMVKTYKSFEFFLP----------DNEEGLKIRKQCALAALNDVRKFLSEE
General information:
TITO was launched using:
RESULT:
Template:
1BIF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 16564 for 223 contacts (74.3/contact) +
2D Compatibility (PS) -5041 + (NN) -3315 + (LL) 2320
1D Compatibility (HY) -2800 + (ID) 750
Total energy: 6978.0 ( 31.29 by residue)
QMean score : 0.281
(partial model without unconserved sides chains):
PDB file :
Tito_1BIF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BIF-query.scw
PDB file :
Tito_Scwrl_1BIF.pdb
: