Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKEDIINKLKQACSSQDVEITKSDLSKIFDALMKIIKGKLDEEGEIRLHGIGTFSTAISQEKQCRNPQNGEIMTVPQKTRVKFKASQTLLSILNKEKEEVIS
4QJN Chain:A ((1-85))
MNKTDLINAV-----AEQADLTKKEAGSAVDAVFESIQNSLAKGEKVQLIGFGNFEVRERAARKGRNPQTGKEIDIPASKVPAFKAGKALKDAVK--------
General information:
TITO was launched using:
RESULT:
Template:
4QJN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12319 for 445 contacts (-27.7/contact) +
2D Compatibility (PS) -8967 + (NN) -996 + (LL) 1036
1D Compatibility (HY) -4000 + (ID) 1250
Total energy: -26496.0 ( -59.54 by residue)
QMean score : 0.413
(partial model without unconserved sides chains):
PDB file :
Tito_4QJN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QJN-query.scw
PDB file :
Tito_Scwrl_4QJN.pdb
: